Antimicrobial Screening

Visualize & Quantify Antimicrobial Investigations

Antimicrobial screening often requires the assessment of many compounds under near identical conditions. This makes the use of microplates popular, however, biofilms grown under static conditions are often malnourished and underdeveloped. This can lead to false positive results. positives without sacrificing throughput.   

BioFlux shear flow systems can accommodate up to 24 experiments in parallel, under biologically relevant conditions. This enables the acceleration of antimicrobial discoveries by reducing false positives without sacrificing throughput.   

BioFlux antimicrobial screening workflow

antimicrobial screening workflow1

Antimicrobial investigations using BioFlux

s mutans
(A) S. mutans biofilms were cultured in a BioFlux system for 18 to 24 hours, inoculated with different antibacterial agents, and stained (live cells stained green and dead cells stained red). (B) These results were graphed, showing statistically significant differences between the control and the antimicrobial-treated groups.
real time antimicrobial screening
Inhibition of biofilm development of the MRSA strain USA300 FPR3757 by tilmicosin under a flowing condition (BioFlux 1000 system). The 16 h biofilm formed in the channels was photographed (Left panel). The amount of biomass was monitored and analyzed with BioFlux Montage software 2.3 in real time (Right panel).

Poster spotlight: Growing Mature Biofilms for Antimicrobial Screening, Host-pathogen Interactions, and Adhesion

Key BioFlux Advantages For Antimicrobial Screening Studies

Maximize Screening Throughput with BioFlux 1000HT

BioFlux 1000HT includes:
dioscin under flow biofilms table
Article Highlight

In Silico Screening and In Vitro Assessment of Natural Products with Anti-Virulence Activity against Helicobacter pylori

Helicobacter pylori is one of the most frequently encountered human pathogens. Infection with H. pylori can lead to the development of various gastric diseases, such as peptic ulcers and gastric cancers. 

In this article, Spiegel et al. virtually screened 791 natural substances for anti-biofilm activity. To find the most effective antimicrobial substance, the group leveraged the high throughput capacity of the BioFlux 1000Z to test the 10 top candidates under physiological flow and no flow environments.

FAQs:
Antimicrobial Screening Using the BioFlux

Antimicrobial screening identifies compounds that inhibit or eradicate microorganisms, especially those in biofilms—structured multicellular communities resistant to traditional antimicrobials. Biofilms grown in static microplate assays are often immature and nutritionally limited, leading to false positives. Physiology-relevant screening is essential for discovering effective antimicrobial agents.

 In vivo, biofilms develop under continuous fluid shear—something static assays fail to replicate. Shear flow alters biofilm architecture, nutrient gradients, and drug penetration. Shear flow systems, like the BioFlux, emulate physiological conditions by controlling shear flow rates, thus producing mature, structurally accurate biofilms more reflective of natural infection interfaces

The BioFlux employs well-plate integrated microfluidic channels that enable the delivery of precise, programmable shear flow, dual-gas, and temperature control. This automation accelerates data acquisition and reduces false positives relative to conventional static microplate methods.

Yes. Systems like the BioFlux integrate automated microscopy with microfluidics embedded in standard well-plate formats (6-, 24-, 48-well) that enable live imaging of multiple antimicrobial assays—optimizing throughput without sacrificing physiological relevance.

The pairing of the BioFlux with an inverted microscope, enables real-time visualization of biofilm responses to antimicrobial compounds using live/dead fluorescent stains. This setup allows monitoring cell viability dynamically within the microfluidic channels in BioFlux plates. Integrated imaging software, such as Montage Plus, quantifies biomass and fluorescence intensity over time, providing statistically robust comparisons between treated and control biofilms under shear flow conditions.

The BioFlux has been used to study Streptococcus mutans, MRSA USA300, Helicobacter pylori, Pseudomonas aeruginosa, Acinetobacter baumannii, among others. These studies include both static and shear flow comparisons, revealing the system’s versatility across Gram-positive and Gram-negative ‑biofilms.

Absolutely. BioFlux plates contain microfluidic channels that are embedded in between SBS-standard well-plates and coverslip-glass bottoms. They integrate seamlessly with inverted microscopes (BioFlux 200+ compatible) or offer a turnkey setup (BioFlux 1000HT) for high-resolution, automated imaging.

Yes. By replicating physiological shear flow, the BioFlux allows the growth of more mature and robust biofilms. This reduces non-specific compound hits common in static assays, enhancing the predictive validity of hits for downstream in vivo testing.

FAQs:
Antimicrobial Screening Using the BioFlux

What is antimicrobial screening and why is it important for biofilm research?
Antimicrobial screening identifies compounds that inhibit or eradicate microorganisms, especially those in biofilms—structured multicellular communities resistant to traditional antimicrobials. Biofilms grown in static microplate assays are often immature and nutritionally limited, leading to false positives. Physiology-relevant screening is essential for discovering effective antimicrobial agents.
How does shear flow affect biofilm formation during antimicrobial testing?
In vivo, biofilms develop under continuous fluid shear—something static assays fail to replicate. Shear flow alters biofilm architecture, nutrient gradients, and drug penetration. Shear flow systems, like the BioFlux, emulate physiological conditions by controlling shear flow rates, thus producing mature, structurally accurate biofilms more reflective of natural infection interfaces.
What distinguishes BioFlux microfluidics from traditional microplate antimicrobial assays?
The BioFlux employs well-plate-integrated microfluidic channels that enable precise, programmable shear flow, dual-gas control, and temperature regulation. This approach accelerates data acquisition and is designed to reduce false positives relative to conventional static microplate methods.
Can the BioFlux enhance throughput for antimicrobial compound screening under shear flow?
Yes. The BioFlux integrates automated microscopy with microfluidics embedded in standard well-plate formats (6-, 24-, 48-well) with support for live imaging of multiple antimicrobial assays — designed to support throughput without sacrificing physiological relevance.
How does the BioFlux enable quantitative real-time measures of antimicrobial efficacy?
The pairing of the BioFlux with an inverted microscope enables real-time visualization of biofilm responses to antimicrobial compounds using live/dead fluorescent stains. This setup allows monitoring cell viability dynamically within the microfluidic channels in BioFlux plates. Integrated imaging software, such as Montage Plus, quantifies biomass and fluorescence intensity over time, providing statistically robust comparisons between treated and control biofilms under shear flow conditions.
Is the BioFlux compatible with live cell imaging and microplate workflows?
Yes. BioFlux plates contain microfluidic channels embedded between SBS-standard well plates and coverslip glass bottoms. They are compatible with inverted microscopes (BioFlux 200+) or available in a turnkey configuration (BioFlux 1000HT) for high-resolution, automated imaging.

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