Antibody Applications

CellRaft Technology: Forward Screening for Antibody Discovery

Forward Screening for Antibody Discovery

CellRaft Technology flips the traditional funnel. Instead of screening blind, it allows you to:

Using in-raft assays with flexible fluorescent readouts, researchers can detect generic IgG and antigen-specific antibodies in the same microwell, at the single-cell level.

How It Works

Antibody Discovery, Screening, and Production using CellRaftĀ® Technology

Why Antibody Discovery Needs a New Approach

From research tools to FDA-approved therapeutics, antibodies have revolutionized science and medicine. Yet the road from immunization to validated antibody is long and full of bottlenecks—especially in the early discovery stages.

These methods also require resource intensive downstream assays to determine which cells are producing functional, specific antibodies—wasting time and resources screening cells that may never yield useful hits.
Why Antibody Discovery

Applications Across the Antibody Discovery Pipeline

Skip the sequencing-first approach. Use CellRaft AIR to identify and isolate antigen-specific B cells upfront.

In partnership with Duke University, Cell Microsystems screened 250,000 primary mouse plasma cells to identify antigen-specific target sequences.Ā  Recombinant antibodies produced from these sequences yielded specificity equivalent to commercial antibodies.

Key Benefits:

Antibody Applications B Cell scaled

Streamlined Single B Cell Screening for Rapid Antibody Discovery

Recover lost productivity from poor producing or unstable clones. In a collaboration with Tetracore, the AIR System was used to recover high-producing clones from a population where only 0.1% of cells were still antibody producing. All recovered clones produced >10x more antibody than the parental line and restored functionality to a discontinued commercial kit.

Key Benefits:

Hybridoma Screening Workflow

Antibody Applications Hybridoma scaled

Restoring high-titer antibody production in a hybridoma cell line

When expression doesn’t guarantee function, use CellRaft AIR to find your best producers early. Even in stably transduced, flow cytometry enriched cells, only a fraction actually secrete antibodies suitable for scale.

Key Benefits:

Recombinant Antibody Producer Selection Workflow

Antibody Applications Recombinant scaled
"The purified antibody shows remarkable improvement over the previously purified lots, pre-CellRaft. My manager was so impressed and has asked me to toss all old clones."
Jennifer Walker
Tetracore

Advantages at a Glance

Ensuring cells undergoing gene editing grow into clonal colonies is an essential component of the editing workflow. Using the CellRaft AIRĀ® system, single cells can be imaged and tracked over the course of colony formation. In addition, the knockout phenotypes (elimination of GFP and RFP signal) can be tracked over time which provides a unique capability for phenotypic gene editing screening.

Feature
Traditional Methods
CellRaft AIR System
Throughput
1,000 cells per 10 plates
40,000 cells per array
Function-first screening
āŒ
āœ…
Clonal tracking
āŒ
āœ…
Media usage
~4,000 mL for 10 plates
~3 mL per array
Hands-on time
Dozens of hours
~21 hours total per campaign
Scale flexibility
Limited
Scalable from 1 to 10+ arrays

Want to Start Faster? We’ll Do It for You.

Our applications team offers lab services to help you:

When you’re ready, we’ll help you bring the workflow in-house with full training and support.

Antibody Applications FAQs

How can I screen antibody-secreting cells at single-cell resolution without damaging them?
Conventional screening of antibody-secreting cells often involves single-cell isolation by limiting dilution or FACS, followed by ELISA-based identification of productive clones — a workflow that is inherently low-throughput, and may compromise cell viability, and could fail to capture rare populations. The CellRaft AIR System is designed to support high-throughput screening of tens of thousands of antibody-secreting cells on a single CellRaft Array, with software-guided identification and gentle recovery of desired cells, allowing researchers to detect and recover productive clones while supporting cell viability.
What is the best method to identify high-producing hybridoma clones early?
Many hybridoma campaigns invest significant time expanding clones before identifying productive ones. The CellRaft AIR System is designed to support measurement of antibody secretion directly from individual hybridoma cells early in the workflow, enabling selection and expansion of top-performing clones and reducing time, consumables, and effort spent on non-productive lines.
How can I isolate rare antigen-specific B cells efficiently?
Antigen-specific B cells often comprise less than 0.1% of the B cell population and are easily lost when screening single cells in plates. The CellRaft AIR System supports fluorescent-based detection of both isotype and antigen-specificity, enabling screening of tens of thousands of B cells on a single CellRaft Array and recovery of rare plasma B cell populations.
How do I screen and isolate plasma cells that don't survive flow sorting?
Plasma cells are fragile and short-lived, making them poorly suited to FACS workflows. The CellRaft AIR System is designed to keep plasma cells in place for screening of target-specific antibody secretion, followed by gentle transfer of productive single cells to PCR plates or tubes for molecular analysis — supporting high viability and improved recovery of antibody sequences.
How do I confirm monoclonality in antibody-producing cell lines?
Many single-cell cloning workflows rely on limiting dilution statistics rather than visual proof of monoclonality. The CellRaft AIR System tracks clones from a single cell with time-stamped images, providing image-based documentation of monoclonality that may simplify regulatory submission.
How do I shorten antibody discovery timelines and lower consumable costs?
Many antibody discovery workflows rely on screening single cells in 96- or 384-well plates — a laborious and low-throughput approach. With the CellRaft AIR System, functional screening of tens of thousands of single cells can be performed on a single CellRaft Array, reducing plate usage, media consumption, and hands-on time, and supporting faster selection of high-value, target-specific clones.

Featured Resources

thumbnail Webinar Overcoming Challenges of Antibody Discovery February 25 2026

Webinar

Overcoming the Challenges of Antibody Discovery
Antibody Discovery Poster

Scientific Poster

Antibody Discovery, Screening, and Production using CellRaftĀ® Technology
app note restoring high titer antibody production 202508

Application Note

Restoring high-titer antibody production in a hybridoma cell line
scroll

Ready to accelerate your antibody workflows with forward screening?

Contact Us

If you need support for a product, please submit a support request.